Publikacje

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1. Kus-Liskiewicz M. Polanska J. Korfanty J. Olbryt M. Vydra N. Toma A and Widlak W: Impact of Heat Shock Transcription Factor 1 on global gene expression profiles in cells which induce either cytoprotective or pro-apoptotic response following hyperthermia. BMC Genomics. 2013. 14:456. doi:10.1186/1471-2164-14-456

2. Jurecka-Lubieniecka B. Ploski R. Kula D. Krol A. Bednarczuk T. Kolosza Z. Tukiendorf A. Szpak-Ulczok S. Stanjek-Cichoracka A. Polanska J. Jarzab B: Association between age at diagnosis of Graves' disease and variants in genes involved in immune response. PLoS ONE. 2013. 8(3): e59349. doi:10.1371/journal.pone.0059349

3. Marczyk M, Jaksik R, Polanski A, Polanska J: Adaptive filtering of microarray expression data based on Gaussian mixture decomposition. BMC Bioinformatics 2013, 14(1):101 doi:10.1186/1471-2105-14-101

4. Widlak P. Pietrowska M. Polanska J. Rutkowski T. Jelonek K. Kalinowska-Herok M. Gdowicz-Kotowicz A. Wygoda A. Tarnawski R. Skladowski K: Radiotherapy-related changes in serum proteome patterns of head and neck cancer patients; the effect of low and medium doses of radiation delivered to large volumes of normal tissue. Journal of Translational Medicine. 2013. 11:299. doi:10.1186/1479-5876-11-299

5. Jangamreddy JR. Ghavami S. Grabarek J. Kratz G. Wiechec E. Fredriksson BA. Rao Pariti RK. Cieślar-Pobuda A. Panigrahi S. Łos MJ: Salinomycin induces activation of autophagy. mitophagy and affects mitochondrial polarity: differences between primary and cancer cells. Biochim Biophys Acta. 2013 Sep.1833(9):2057-69. doi: 10.1016/j.bbamcr.2013.04.011.

6. Popowicz A., Kurek A., Filus Z., Bad pixel modified interpolation for astronomical images, Publications of the Astronomical Society of the Pacific (PASP), Vol. 125, No. 931, pp.1119-1125, 2013

7. Pfeifer A. Wojtas B. Oczko-Wojciechowska M. Kukulska A. Czarniecka A. Eszlinger M. Musholt T. Stokowy T. Swierniak M. Stobiecka E. Rusinek D. Tyszkiewicz T. Kowal M. Jarzab M. Hauptmann S. Lange D. Paschke R. Jarzab B: Molecular differential diagnosis of follicular thyroid carcinoma and adenoma based on gene expression profiling by using formalin-fixed paraffin-embedded tissues BMC Medical Genomics 2013, 6:38

8. Cieślar-Pobuda A. Los MJ: Prospects and limitations of Click-Chemistry-based DNA labeling technique employing 5-ethynyl-2'deoxyuridine (EdU). Cytometry A. 2013 Nov.83(11):977-8

9. Y. Saenko, A. Cieślar-Pobuda, M. Skonieczna, J. Rzeszowska-Wolny, Changes of reactive oxygen and nitrogen species and mitochondrial functioning in human K562 and HL60 cells exposed to ionizing radiation. Radiation Research, 2013, 180(4), 360-366.

10. Wojtas B. Pfeifer A. Jarząb M. Czarniecka A. Krajewska J. Swierniak M. Stokowy T. Rusinek D. Kowal M. Zebracka-Gala J. Tyszkiewicz T. Oczko-Wojciechowska M. Stobiecka E. Lange D. Paschke R. Jarzab B: Unsupervised analysis of follicular thyroid tumours transcriptome by oligonucleotide microarray gene expression profiling. Endokrynol Pol. 2013;64(5):328-334.

11. Kordecki A. Palus H. Bal A: Kalibracja kolorymetryczna w procesie pozyskiwania obrazów. Przegląd Elektrotechniczny, 2013 R. 89 nr 4. s. 80-83

12. Popowicz A., Optical identification of crystal defects in CCD matrix, Przegląd Elektrotechniczny, R 89, Nr 3a, pp 79-82, 2013

13. Popowicz A., Aproksymacja czasowych zależności prądu ciemnego w matrycach CCD, Przegląd Elektrotechniczny, R 89, No 1a, pp 126-128, 2013

14. Badanie efektywności czasowej języków typu RPG oraz uniwersalnego języka programowania dla dostępu do informacj

15. Smolka B. Malik K: Reduced ordering based approach to impulsive noise suppression in color images, ACEEE Int. Journal on Signal and Image Processing, Vol. 4, No. 3, 44-49, 2013

16. Cichonska A. Jaksik R. Widlak W. Polanska J: Comparative Analysis of the Annotation System of Mus Musculus 3' High Density expression Microarray. International Work-Conference on Bioinformatics and Biomedical Engineering IWBBIO 2013, pp.41-48. Eds. F. Ortuno, I. Rojas ISBN: 978-84-15814-13-9, 18-20.03.2013. Granada. Spain

17. Zyla J. Finnon P. Bulman R. Bouffler S. Badie C. Polanska J: Seeking for Genetic Signature of Radiosensitivity - Methods for data analysis. International Work-Conference on Bioinformatics and Biomedical Engineering IWBBIO 2013, p.79-86. Eds. F. Ortuno, I. Rojas ISBN: 978-84-15814-13-9, 18-20.03.2013 Granada, SPAIN

18. Polanska J. Binczyk F. Hebda A. Bobek-Bilewicz B: Gaussian mixture model based analysis of apparent diffusion coefficient maps for differentiation between maligant and benign brain tumours - prelimnary results. International Work-Conference on Bioinformatics and Biomedical Engineering IWBBIO 2013, pp.647-648. Eds. F. Ortuno, I. Rojas ISBN: 978-84-15814-13-9, 18-20.03.2013. Granada. Spain.

19. Radlak K., Smolka B.: Trimmed Non-Local Means Technique for Mixed Noise Removal in Color Images. In: Proceedings IEEE International Symposium on Multimedia (ISM2013) 2013 p.405-406

20. Radlak K., Smolka B: Blink detection based on the weighted gradient descriptor. In: Proceedings of the 8th International Conference on Computer Recognition Systems CORES 2013. Advances in Intelligent Systems and Computing. R. Burduk. K. Jackowski. M. Kurzynski. M. Wozniak. and A. Zolnierek. Springer International Publishing. vol. 226. pp. 691–700 ISBN: 978-3-319-00968-1

21. Smolka B. Malik K: Reduced Ordering Technique of Impulsive Noise Removal in Color Images. In Computational Color Imaging. volume 7786 of Lecture Notes in Computer Science. pages 296-310. Springer Berlin Heidelberg. 2013. ISBN: 978-3-642-36699-4

22. Palus H. Frackiewicz M: A study on clustering for colour image quantisation. in: Joao Manuel R.S. Tavares and R. M. Natal Jorge /eds./. Computational Vision and Medical Image Processing IV. VipIMAGE 2013. 81-86. Taylor & Francis Group. London 2013, ISBN: 978-1-138-00081-1-0

23. Zyla J. Finnon P. Bulman R. Bouffler S. Badie C. Polanska J: Investigation for genetic signature of radiosensitivity - data analysis. In Advances in Intelligent Systems and Computing, vol. 242 "Man-Machine Interactions 3", Eds. Gruca A, Czachorski T, Kozielski S, p: 219-227. Springer Berlin Heidelberg 2014. ISBN: 978-3-319-02308-3. ICMMI 2013, 22-25.10.2013 Brenna, Poland

24. Widłak P, Pietrowska M, Polanska J, Rutkowski T, Wygoda A, Tarnawski R, Składowski K: Radiation Therapy-Related Changes in Serum Proteome Patterns Are Affected by Medium Doses of Radiation Delivered to Large Volumes of Normal Tissue. International Journal of Radiation Oncology Biology Physics, vol.87(2):S638, 55th Annual Meeting of the American Society for Radiation Oncology ASTRO, 22-25.09.2013, Atlanta, USA.

25. Smolka B: Fast soft switching impulsive noise removal in color images, Proceedings of IV ECCOMASS Thematic Conference on Computational Vision and Medical Image Madeira, Portugal, CRC Press 2013, Eds: Tavares, JMRS; Jorge, RMN

26. Smolka B: Soft switching technique for impulsive noise removal in color images, Proceedings of IEEE Conference on Computational Intelligence, Communication Systems and Networks p.222-227 ISBN:978-1-4799-0587-4, Madrid, Spain, 2013

27. Gajda K, Skonieczna M, Cieślar-Pobuda A, Saenko Y, Rzeszowska-Wolny J, Induction of reactive oxygen and nitrogen species at different stages of the cell cycle and after exposure of human K562 and HL60 cells to ionizing radiation. Febs Journal 280: 244-244. (38th Congress of the Federation-of-European-Biochemical-Societies (FEBS), Saint Petersburg, RUSSIA Date: JUL 06-11, 2013)

28. Pietrowska M. Polanska J. Domińczyk I. Rutkowski T. Gdowicz-Kłosok A. Roś M. Składowski K. Widlak P: Dose-related changes in serum proteome profiles of patients treated with radiotherapy due to head and neck cancer. 2nd International Radiation Proteomics Workshop 2013. 30-31.01.2013. Monachium. Germany

29. Widlak P. Pietrowska M. Polanska J. Rutkowski T. Domińczyk I. Gdowicz-Kłosok A. Roś M. Jelonek K. Składowski K: Serum proteome profiling by MALDI-ToF-MS detection of radiation low-dose effect in cancer patients. 31st Informal Meeting on Mass Spectrometry. 5-8.05.2013. Palermo. Włochy

30. Gdowicz-Kłosok MA. Chwieduk A. Namysł-Kaletka A. Szołtysek K. Pietrowska M. Wydmański J. Plechawska-Wójcik M. Polanska J. Widlak P: Application of MALDI-ToF based serum proteome pattern analysis in classification of patients with gastric cancer. 31st Informal Meeting on Mass Spectrometry. 5-8.05.2013. Palermo. Włochy.

31. Pietrowska. M. Michalak. M. Kalinowska-Herok. K. Polanski. J. Polanska. M. Giglok. K. Jelonek. P. Rodziewicz. K. Chmielewska. R. Tarnawski. R. Suwiński. Widlak P: MS-based detection and identification of serum proteins. which levels are associated with the progression of lung cancer. 31st Informal Meeting on Mass Spectrometry. 5-8.05.2013. Palermo. Włochy

32. Marczyk M, Polanska J, Polanski A: Peak detection by Gaussian mixture modeling of MALDI-ToF spectra for proteome profiling. Book of abstracts, poster M 26. 21st Annual International Conference on Intelligent Systems for Molecular Biology ISMB/ECCB 2013, 21-23.07.2013. Berlin. Germany

33. Binek A. Rembierz-Knoll A. Polanska J. Jarosz-Chobot P:The reasons for pump discontinuation in children with diabetes type 1 (T1DM). Pediatric Diabetes 2013. vol.14(S18):46. 39th Annual Meeting of the International Society for Pediatric and Adolescent Diabetes “Pediatric diabetes in long-life perspective” ISPAD 2013. 16-19.10.2013, Gotheborg, Sweden

34. Chobot A. Wenzlau J. Bąk-Drabik K. Krzywicka A. Kwiecień J. Skała-Zamorowska E. Polanska J. Rewers M: Does Helicobacter pylori infection influence the prevalence of ATP4A autoantibodies in children with type 1 diabetes?. Pediatric Diabetes 2013. vol.14(S18):44. 39th Annual Meeting of the International Society for Pediatric and Adolescent Diabetes “Pediatric diabetes in long-life perspective” ISPAD 2013. 16-19.20.2013. Gotheborg, Sweden

35. Zyla J. Badie C. Alsbeih G. Polanska J: Discovery of polymorphisms responsible for radiosensitivity - preliminary analysis. Acta Biochim Polonica vol.60(Suppl.1):114. 48th Annual Meeting of the Polish Biochemical Society. 2-5.09.2013. Toruń, POLAND

36. Binczyk F. Hebda A. Bobek-Billewicz B. Tarnawski R. Polanska J: Multidimensional mixture modelin as possible way of improvement in analysis of nuclear magnetic resonance spectroscopy data - prelimnary analysis Acta Biochim Polonica vol.60(Suppl.1):96. 48th Annual Meeting of the Polish Biochemical Society. 2-5.09.2013. Toruń, Poland

37. Frackiewicz M. Palus H: Outlier-based initialisation of k-means in colour image segmentation. Proceedings of 2nd International Conference on Informatics and Applications. (ICIA 2013). 36-41. Łódź. Poland 2013.

38. Smolka B. Malik K: Fast technique for mixed Gaussian and impulsive noise suppression in color images. IEEE AFRICON 2013. Mauritius. 2013

39. Zyla J: Genome-Wide Association study as a tool in common disease research. XI International PhD Workshop OWD 2013. Conference Archives PTETiS. vol. 33. p.438-441. 2013. ISBN: 978-83-935427-2-7

40. Binczyk F: Game theory combined with network analysis - good approach for analysis of brain tumor growth? PhD Workshop OWD 2013. Conference Archives PTETiS. vol. 33. p.442-445. 2013. ISBN: 978-83-935427-2-7.

41. Zyla J. Badie C. Alsbeih G. Polanska J: Gene - cell-cycle correlation in response to ionizing radiation (preliminary analysis). XVII Gliwice Scientific Meetings, Book of abstracts, p. 177. 15-16.11.2013, Gliwice, Poland

42. Binczyk F. Bobek-Bilewicz B. Hebda A. Hejduk B. Polanska J: The differentation of head/neck tumors with use of information about the diffusion of water molecules obtained from nuclear magnetic resonance data. XVII Gliwice Scientific Meetings. Book of abstracts, p. 178. 15-16.11.2013, Gliwice, Poland

43. Binczyk F. Staniszewski M. Polnik A. Boguszewicz Ł. Sokół M. Polanski A. Polanska J: The detection of neural progenitor cell signal in nuclear magnetic resonance spectroscopy data. XVII Gliwice Scientific Meetings, Book of abstracts, p. 179. 15-16.11.2013. Gliwice, Poland

44. Marczyk M, Polanska J, Polanski A: A parallel implementation of MALDI-Tof spectra modeling on CUDA-enabled graphics hardware. XVII Gliwice Scientific Meetings, Book of abstracts, p.175. 15-16.11.2013, Gliwice, Poland

45. Radlak K., Smolka B., Radlak N: Multiplicative noise removal in medical ultrasound images using trimmed non-local means technique. XVII Gliwice Scientific Meetings. Gliwice 15-16.11.2013. p. 152

46. Papiez A. Finnon P. Bouffler S. Badie C. Polanska J: Methods for meta-analysis of expression data from different microarray platforms. XVII Gliwice Scientific Meetings. Book of abstracts, p. 181. 15-16.11.2013. Gliwice. Poland

47. Pfeifer A. Oczko-Wojciechowska M. Wojtas B. Polanska J. Jarzab B: Detection of fusion transcripts in next generation sequencing data – analysis of methods. Współczesna Onkologia 17(Supp. 1):131. V Kongres Współczesnej Onkologii - Next Generation. 21–23.03.2013. Poznań. Poland.

48. Pfeifer A. Oczko-Wojciechowska M. Tyszkiewicz T. Jarzab B: Applying next generation sequencing to detect mutations in the thyroid cancer. 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB). Berlin. July 21-23. 2013

49. Staniszewski M. Binczyk F. Polanska J. Polanski A: Comparison of available computer software for nuclear magnetic spectroscopy, 21st Annual International Conference on Intelligent Systems for Molecular Biology, 12th European Conference on Computational Biology ISMB/ECCB 2013, 21-23.07.2013. Berlin. Germany

50. Ghaghada K. Villamizar C. Starosolski Z. Annapragada A. Milewicz D: CT Angiography in a Transgenic Mouse Model of Cerebrovascular Disease, Pediatric Radiology 2013 43(Suppl 2): S205-S458, pp.311, PA-066,DOI:10.1007/s00247-013-2638-9,IS

51. Tanifum E. Fowler S. Jankowsky J. Starosolski Z. Jiang Y. Annapragada A: Blood-brain barrier permeability in transgenic amyloid overproducing models: implications for Downs Syndrome Pediatric Radiology, 2013 43(Suppl 2): S205-S458, pp.281, Paper# PA-021 DOI:10.1007/s00247-013-2638-9

52. Starosolski Z. Kan JH. Rosenfeld SB. Annapragada A: 3D Printing in the Pre-operative Assessment of Subtalar Coalitions Compared to 2-D and 3D CT Datasets Radiological Society of North America (RSNA) 2013 Annual Meeting

53. Annapragada A. Starosolski Z. Fowler S. Tanifum E. Ghaghada K. Jankowsky J: Cerebral Vascular Leaks in a Mouse Model of Alzheimer's Disease Measured by Nanoparticle CT contrast, Radiological Society of North America (RSNA) 2013 Annual Meeting

54. Luszczkiewicz-Piatek M. Smolka B: Color image retrieval based on spatio-chromatic multichannel Gaussian mixture modeling, Proceedings of IEEE Int. Symposium on Image and Signal Processing and Analysis p.130-135, (ISPA), Trieste, Italy, 2013

55. Smolka B: Fast impulsive noise removal in color images, Proceedings of IEEE Int. Conference on Image Processing p.1212-1216, (ICIP), Melbourne, Australia, 2013.

56. Pietrowska M, Jelonek K, Michalak M, Gdowicz-Kłosok A, Roś M, Rodziewicz P, Chmielewska K, Polański K, Polanska J, Giglok M, Suwiński R, Tarnawski R, Dziedziuszko R, Rzyman W, Widłak P: Identification of serum proteome components associated with progression of non-small cell lung cancer. XVII Gliwice Scientific Meetings, Book of abstracts, p.71. 15-16.11.2013, Gliwice, Poland

57. Gdowicz-Kłosok A, Chwieduk A, Namysł-Kaletka A, Szołtysek K, Pietrowska M, Wydmański J, Plechawska-Wójcik M, Polanska J, Widłak P: Serum Proteome analysis of metastatic Changes in Patients with Gastric Cancer by MALDI-ToF Mass Spectometry XVII Gliwice Scientific Meetings, Book of abstracts, p.59. 15-16.11.2013, Gliwice, Poland

58. Los MJ, Jangamreddy JR, Ghavami S, Cieślar-Pobuda A: Salinomycin – experimental drug with preferred toxicity towards cancer stem cells, the role of autophagy in salinomycin toxicity. XVII Gliwice Scientific Meetings, Book of abstracts, p.46. 15-16.11.2013, Gliwice, Poland

59. Popowicz A., Problemy prądu ciemnego w systemach CCD małych teleskopów, Konferencja Wykorzystanie Małych Teleskopów 2013, Kraków-Koninki, 9-11 maj 2013 (wyłącznie referat)

60. Deja G. Borowiec M. Jarosz-Chobot P. Fendler W. Machnica Ł. Pietrzak I. Szadkowska A. Polanska J. Młynarski W: Ocena czynników ryzyka zaburzeń cieśnienia tętniczego u nastolatków i młodych dorosłych z cukrzycą typu 1. Diabetologia Kliniczna (Clinical Diabetology); 2(2):32. XIV Zjazd Polskiego Towarzystwa Diabetologicznego. 23-25.05.2013. Łódź. Poland

61. Binek A. Rembierz-Knoll A. Polanska J. Jarosz-Chobot P: Przyczyny przerwania terapii osobistą pompą insulinową u dzieci z cukrzycą typu 1. Diabetologia Kliniczna (Clinical Diabetology); 2(2):53. XIV Zjazd Polskiego Towarzystwa Diabetologicznego. 23-25.05.2013. Łódź. Poland

62. Chobot A. Skała-Zamorowska E. Bąk-Drabik K. Krzywicka A. Kwiecień J. Polanska J: Zakażenie Helicobacter Pylori u dzieci z cukrzycą typu 1. Diabetologia Kliniczna (Clinical Diabetology); 2(2):54. XIV Zjazd Polskiego Towarzystwa Diabetologicznego. 23-25.05.2013. Łódź. Poland

63. Bernacki K., Wybrańczyk D., Popowicz A., Meiser D., Analiza porównawcza zaburzeń promieniowanych dla bezzałogowych platform latających z uwzględnieniem elektrycznych układów silnikowych, VIII Krajowe Sympozjum Kompatybilności Elektromagnetycznej w Elektrotechnice i Elektronice, 17-18 październik 2013, Łódź (wyłącznie referat, artykuł przedrukowany w Przeglądzie Elektrotechnicznym jako osobna pozycja)

64. Cyran KA. Kawulok J. Kawulok. M. Stawarz M. Michalak M.Pietrowska M. Widlak P. Polanska J: Support Vector Machines in Biomedical and Biometrical applications. in S. Ramanna and R. J. Howlett (Eds.) Emerging Paradigms in Machine Learning. seria Smart Innovation. Systems and Technologies. vol.13. pp.379-417. Springer Verlag 2013. ISBN: 978-3-642-28698-8

65. Palus H. Frackiewicz M: Colour quantisation as a preprocessing step for image segmentation. W: Topics in medical image processing and computational vision. Eds.: J.M.R.S. Tavares. R.M.N. Jorge. Dordrecht. Springer. 2013. s. 119-138. (Lecture Notes in Computational Vision and Biomechanics; vol. 8) ISBN:978-9400707252

66. A. Kordecki „Kalibracja kolorymetryczna urządzeń pozyskiwania obrazów” w M. Michalski, P. Krajewski, M. Mackiewicz, „B+R = Konkurencyjność gospodarcza”, str. 119-120, 2013, ISBN 978-83-7834-195-6